A new scripting node was developed that assigns annotation confidence levels based on the widely adopted Schymanski et al. scoring scheme. Please see https://pubs.acs.org/doi/10.1021/acs.analchem.5c03229 for more details.

The scripting node for Compound Discoverer 3.3, 3.4 and 3.5 can be downloaded here https://mycompounddiscoverer.com/annotation-confidence-scoring/ .