ChemSpider recently removed PubChem as a data source. Therefore, PubChem is no longer available in the Search ChemSpider node.

Please click links below to download the updated E&L unknown workflow templates:
CD 3.0: Resources – CD 3.0 page
CD 2.1: Resources – CD 2.1 page
CD 2.0: Resources – CD 2.0 page

For current Compound Discoverer 2.1 users:
To download the service pack, log into Flexera and download the service pack and installation instructions from TMO-Prospects account | Demo | Compound Discoverer 2.1 SP1 Upgrade From 2.1.

For current Compound Discoverer 2.0 users:
The electronic upgrade to Compound Discoverer 2.1 SP1 is free! Log into Flexera and download 2.1 SP1 from TMO-Prospects account | Demo | Compound Discoverer 2.1 SP1 Demo and Upgrade From 2.0.

For current Compound Discoverer 1.0 users:
Contact your Thermo sales person to purchase the Compound Discoverer 2.1 SP1 Upgrade From 1.0. To try out the 2.1 SP1 demo version for 60 days, use the instructions for new users below.

For new users:
To download the Compound Discoverer 2.1 SP1 Demo (CD 2.1 SP1 Demo), go to the Thermo Scientific Software Portal (Flexera) and download it from the “Compound Discoverer 2.1 SP1 Demo and Upgrade From 2.0” folder. Use the instructions for CD 2.1 SP1 Demo.

Click here for full instructions.

Three new tutorial quick video have been added:
1. Use Custom Explanations to elucidate structure and run FISh Scoring on the fly for expected or unknown compounds.
2. How to correlate specialized traces (UV, PDA, analog traces or pattern traces) to MS peaks.
3. How to report manual peaks with correlated MS peaks.

New tutorial quick video is now available on how to copy a structure from Related Structures table and save as a .mol file.

View the new tutorial quick video on Data Processing nodes including the Mass Defect Filter node and Retention Time Aligner node.

New Resources page where you can download or view scientific posters, application notes and presentations highlighting the use of Compound Discoverer for various small molecule research applications.

View the new tutorial quick video on how to use the filter tool in results review. For example, use the filter tool to filter out peaks that only exist in the Control.

Check out the new tutorial quick video on how to process data by creating an analysis in Tutorials | Tutorial Quick Videos.